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  5. Bradi3g04020

Bradi3g04020


Description : RING/U-box superfamily protein


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g04020
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
A4A49_05223 No alias putative e3 ubiquitin-protein ligase hip1 0.04 Orthogroups_2024-Update
A4A49_24395 No alias e3 ubiquitin-protein ligase mbr2 0.03 Orthogroups_2024-Update
Glyma.12G158460 No alias RING/U-box superfamily protein 0.06 Orthogroups_2024-Update
Solyc10g084870 No alias LOW QUALITY:ATP synthase subunit b, chloroplastic (AHRD... 0.05 Orthogroups_2024-Update
Sopen01g050120 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 529 571
No external refs found!