Description : auxin response factor 6
Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi3g04920 | |
Cluster | HCCA clusters: Cluster_149 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_20678 | No alias | auxin response factor 1 | 0.03 | Orthogroups_2024-Update | |
A4A49_26861 | No alias | auxin response factor 18 | 0.02 | Orthogroups_2024-Update | |
At1g34310 | No alias | Auxin response factor 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID4] | 0.02 | Orthogroups_2024-Update | |
At2g28350 | No alias | Auxin response factor (Fragment)... | 0.03 | Orthogroups_2024-Update | |
Bradi4g17410 | No alias | auxin response factor 2 | 0.05 | Orthogroups_2024-Update | |
GRMZM2G352159 | No alias | auxin response factor 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.06G164900 | No alias | auxin response factor 2 | 0.02 | Orthogroups_2024-Update | |
Glyma.08G008100 | No alias | auxin response factor 2 | 0.03 | Orthogroups_2024-Update | |
Glyma.12G164100 | No alias | auxin response factor 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G140600 | No alias | auxin response factor 16 | 0.03 | Orthogroups_2024-Update | |
LOC_Os06g09660 | No alias | auxin response factor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os06g48950 | No alias | auxin response factor 19, putative, expressed | 0.04 | Orthogroups_2024-Update | |
MA_40335g0010 | No alias | (at5g62000 : 752.0) Encodes an auxin response factor.... | 0.02 | Orthogroups_2024-Update | |
MA_92651g0010 | No alias | (at5g62000 : 742.0) Encodes an auxin response factor.... | 0.04 | Orthogroups_2024-Update | |
Pp1s339_47V6 | No alias | auxin response factor 10 | 0.02 | Orthogroups_2024-Update | |
Pp1s341_4V6 | No alias | arf1-binding protein | 0.03 | Orthogroups_2024-Update | |
Seita.1G195500.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Seita.8G135700.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Sobic.002G290600.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Sobic.010G073600.1 | No alias | ARF-type transcription factor & auxin signal mediator... | 0.04 | Orthogroups_2024-Update | |
Solyc04g081240 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
Sopen03g037200 | No alias | Auxin response factor | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
BP | GO:0009725 | response to hormone | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Predicted GO |
MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015693 | magnesium ion transport | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016301 | kinase activity | IEP | Predicted GO |
BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0036211 | protein modification process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0070838 | divalent metal ion transport | IEP | Predicted GO |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Predicted GO |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
CC | GO:1903293 | phosphatase complex | IEP | Predicted GO |
No external refs found! |