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  5. Sopen07g002080

Sopen07g002080


Description : PPR repeat family


Gene families : OG_42_0007361 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007361_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen07g002080
Cluster HCCA clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
Potri.006G005100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Solyc07g005950 No alias Pentatricopeptide repeat-containing protein, putative... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 237 288
IPR002885 Pentatricopeptide_repeat 626 653
IPR002885 Pentatricopeptide_repeat 314 340
IPR002885 Pentatricopeptide_repeat 350 378
IPR002885 Pentatricopeptide_repeat 766 796
IPR002885 Pentatricopeptide_repeat 209 234
IPR002885 Pentatricopeptide_repeat 595 620
IPR002885 Pentatricopeptide_repeat 802 843
IPR002885 Pentatricopeptide_repeat 698 741
IPR002885 Pentatricopeptide_repeat 869 917
IPR002885 Pentatricopeptide_repeat 380 426
No external refs found!