Bradi3g06577

Description : ABC transporter family protein

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g06577
Cluster	HCCA clusters: Cluster_238

Target	Alias	Description	ECC score	Gene Family Method
123915	No alias	P-glycoprotein 11	0.02	Orthogroups_2024-Update
At3g28360	No alias	ABC transporter B family member 16...	0.04	Orthogroups_2024-Update
At3g55320	No alias	ABC transporter B family member 20...	0.03	Orthogroups_2024-Update
Bradi2g17720	No alias	P-glycoprotein 11	0.03	Orthogroups_2024-Update
Bradi2g47337	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Bradi2g47360	No alias	P-glycoprotein 11	0.03	Orthogroups_2024-Update
Bradi2g47410	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Brara.D02245.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.I02993.1	No alias	subfamily ABCB transporter	0.05	Orthogroups_2024-Update
GRMZM2G085236	No alias	ATP binding cassette subfamily B19	0.03	Orthogroups_2024-Update
GRMZM5G891159	No alias	P-glycoprotein 20	0.02	Orthogroups_2024-Update
Glyma.08G342600	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Glyma.10G290800	No alias	P-glycoprotein 20	0.02	Orthogroups_2024-Update
HORVU3Hr1G117180.29	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Mp1g26440.1	No alias	subfamily ABCB transporter	0.01	Orthogroups_2024-Update
PSME_00024064-RA	No alias	(at3g28345 : 1431.0) ABC transporter family protein;...	0.02	Orthogroups_2024-Update
Potri.010G003000	No alias	ATP binding cassette subfamily B4	0.02	Orthogroups_2024-Update
Pp1s30_122V6	No alias	multidrug pheromone mdr abc transporter family	0.02	Orthogroups_2024-Update
Sobic.004G073400.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.006G105600.1	No alias	auxin efflux transporter *(ABCB19) & subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.006G236700.1	No alias	auxin efflux transporter *(ABCB19) & subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.007G042600.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005319	lipid transporter activity	IEP	Predicted GO
MF	GO:0005548	phospholipid transporter activity	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006869	lipid transport	IEP	Predicted GO
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO
BP	GO:0015711	organic anion transport	IEP	Predicted GO
BP	GO:0015748	organophosphate ester transport	IEP	Predicted GO
BP	GO:0015914	phospholipid transport	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
MF	GO:0070003	threonine-type peptidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	35	307
IPR011527	ABC1_TM_dom	677	945
IPR003439	ABC_transporter-like	380	526
IPR003439	ABC_transporter-like	1016	1164

External Links

No external refs found!

Bradi3g06577

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation