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  5. Bradi3g06950

Bradi3g06950


Description : KH domain-containing protein / zinc finger (CCCH type) family protein


Gene families : OG_42_0001307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g06950
Cluster HCCA clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G025870.1 No alias regulatory protein *(KHZ) of autonomous floral-promotion pathway 0.03 Orthogroups_2024-Update
Potri.001G013200 No alias KH domain-containing protein / zinc finger (CCCH type)... 0.03 Orthogroups_2024-Update
Solyc01g014860 No alias Unknown protein (AHRD V3.3 ) 0.03 Orthogroups_2024-Update
Solyc03g063200 No alias Zinc finger transcription factor 25 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 419 480
IPR000571 Znf_CCCH 514 539
IPR000571 Znf_CCCH 347 370
No external refs found!