1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi3g08380

Bradi3g08380


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g08380
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
172407 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
A4A49_05017 No alias heterogeneous nuclear ribonucleoprotein 1 0.03 Orthogroups_2024-Update
Bradi3g28430 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
LOC_Os08g23120 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00001372-RA No alias (at5g55550 : 256.0) RNA-binding (RRM/RBD/RNP motifs)... 0.07 Orthogroups_2024-Update
PSME_00009923-RA No alias (at3g07810 : 104.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
Sobic.002G355300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.tig00001130.27 No alias (at5g55550 : 194.0) RNA-binding (RRM/RBD/RNP motifs)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 67 134
IPR000504 RRM_dom 156 225
No external refs found!