Bradi3g08790

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g08790
Cluster	HCCA clusters: Cluster_267

Target	Alias	Description	ECC score	Gene Family Method
68470	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
73155	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
80895	No alias	ethylene responsive element binding factor 2	0.02	Orthogroups_2024-Update
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.04	Orthogroups_2024-Update
A4A49_38622	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
At1g01250	No alias	Ethylene-responsive transcription factor ERF023...	0.02	Orthogroups_2024-Update
At2g35700	No alias	ERF38 [Source:UniProtKB/TrEMBL;Acc:A0A178VWJ3]	0.02	Orthogroups_2024-Update
At4g39780	No alias	Ethylene-responsive transcription factor ERF060...	0.02	Orthogroups_2024-Update
At5g25810	No alias	Tny [Source:UniProtKB/TrEMBL;Acc:A0A178URN2]	0.02	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi5g17640	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.D02449.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Brara.E02969.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Brara.F01050.1	No alias	cutin and suberin biosynthesis transcription factor...	0.04	Orthogroups_2024-Update
Brara.F01354.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
Brara.H02264.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.H02538.1	No alias	cutin and suberin biosynthesis transcription factor...	0.02	Orthogroups_2024-Update
Brara.H02645.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.I01326.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.I03370.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.J00757.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.02	Orthogroups_2024-Update
Brara.J02528.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G149756	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G174917	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
Glyma.01G231200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.04G238700	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Glyma.04G251400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.05G049800	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.06G125100	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Glyma.10G099800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.18G252400	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.19G163900	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Glyma.19G192400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G253100	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.19G262700	No alias	related to AP2 2	0.02	Orthogroups_2024-Update
Glyma.20G172800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU4Hr1G013410.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
HORVU4Hr1G077310.1	No alias	subgroup ERF-VII transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G080340.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os03g08500	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g41760	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g40150	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os09g39850	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_164803g0010	No alias	(at5g11590 : 119.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_40338g0010	No alias	(at1g21910 : 84.7) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_436575g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_54341g0010	No alias	(at1g15360 : 131.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
MA_9294379g0010	No alias	(at5g11590 : 120.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_938274g0010	No alias	(at4g17500 : 97.8) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
Mp1g20040.1	No alias	transcription factor (ERF)	0.02	Orthogroups_2024-Update
PSME_00003641-RA	No alias	(at3g14230 : 136.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00037661-RA	No alias	(at4g17500 : 149.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.003G079300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.018G028000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.019G073300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s204_42V6	No alias	ap2 erf domain-containing transcription factor	0.01	Orthogroups_2024-Update
Pp1s60_148V6	No alias	ap2 erf domain-containing transcription factor	0.01	Orthogroups_2024-Update
Seita.1G259000.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.1G351800.1	No alias	subgroup ERF-V transcription factor	0.02	Orthogroups_2024-Update
Seita.2G430400.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.3G289200.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Seita.9G455400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.001G473900.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G139400.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G442100.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.010G016500.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc06g082590	No alias	DNA-binding protein Pti6	0.02	Orthogroups_2024-Update
Solyc10g080310	No alias	Dehydration responsive element binding transcription...	0.02	Orthogroups_2024-Update
Sopen03g033540	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen07g027720	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen12g003310	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004743	pyruvate kinase activity	IEP	Predicted GO
CC	GO:0005811	lipid droplet	IEP	Predicted GO
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Predicted GO
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015297	antiporter activity	IEP	Predicted GO
MF	GO:0030955	potassium ion binding	IEP	Predicted GO
MF	GO:0031420	alkali metal ion binding	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	45	91

External Links

No external refs found!

Bradi3g08790

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation