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  5. Bradi3g09380

Bradi3g09380


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g09380
Cluster HCCA clusters: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
A4A49_21867 No alias flavin-dependent oxidoreductase fox1 0.02 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Brara.K01808.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.04G113500 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G091500.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
HORVU7Hr1G026630.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
LOC_Os08g41350 No alias FAD-binding domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_186285g0010 No alias (at1g30760 : 375.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.011G163000 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Seita.6G055100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Solyc02g070070 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT2G34790.1) 0.03 Orthogroups_2024-Update
Sopen02g019250 No alias Berberine and berberine like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 458 521
IPR006094 Oxid_FAD_bind_N 74 215
No external refs found!