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  5. Bradi3g09730

Bradi3g09730


Description : Ribosomal protein L21


Gene families : OG_42_0002830 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g09730
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
410329 No alias Ribosomal protein L21 0.03 Orthogroups_2024-Update
Brara.H00579.1 No alias component *(bL21c) of large plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
GRMZM2G018403 No alias Ribosomal protein L21 0.03 Orthogroups_2024-Update
HORVU6Hr1G041020.1 No alias component *(bL21c) of large plastid ribosomal-subunit proteome 0.11 Orthogroups_2024-Update
LOC_Os02g15900 No alias 50S ribosomal protein L21, chloroplast precursor,... 0.03 Orthogroups_2024-Update
Potri.013G112900 No alias Ribosomal protein L21 0.05 Orthogroups_2024-Update
Potri.019G083400 No alias Ribosomal protein L21 0.13 Orthogroups_2024-Update
Seita.1G012400.1 No alias component *(bL21c) of large plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Sobic.004G116100.1 No alias component *(bL21c) of large plastid ribosomal-subunit proteome 0.14 Orthogroups_2024-Update
Solyc06g065390 No alias 50S ribosomal protein L21, chloroplastic (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen06g023870 No alias Ribosomal prokaryotic L21 protein 0.08 Orthogroups_2024-Update
evm.model.tig00001371.5 No alias (at4g30930 : 87.0) Encodes a ribosomal RPL21M protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR028909 L21p-like 93 193
No external refs found!