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  5. Sopen07g002740

Sopen07g002740


Description : CCT motif


Gene families : OG_42_0000725 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g002740
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
102790 No alias CONSTANS-like 4 0.02 Orthogroups_2024-Update
102902 No alias CONSTANS-like 5 0.02 Orthogroups_2024-Update
A4A49_38110 No alias zinc finger protein constans-like 2 0.03 Orthogroups_2024-Update
A4A49_38205 No alias zinc finger protein constans-like 5 0.03 Orthogroups_2024-Update
At2g24790 No alias Zinc finger protein CONSTANS-LIKE 3... 0.02 Orthogroups_2024-Update
At3g02380 No alias Zinc finger protein CONSTANS-LIKE 2... 0.02 Orthogroups_2024-Update
At5g24930 No alias Zinc finger protein CONSTANS-LIKE 4... 0.03 Orthogroups_2024-Update
At5g57660 No alias Zinc finger protein CONSTANS-LIKE 5... 0.04 Orthogroups_2024-Update
Brara.B00625.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Brara.C02983.1 No alias floral promoter *(CONSTANS) 0.03 Orthogroups_2024-Update
Brara.F02700.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.02 Orthogroups_2024-Update
Glyma.13G093800 No alias CONSTANS-like 5 0.08 Orthogroups_2024-Update
Glyma.17G066600 No alias CONSTANS-like 5 0.08 Orthogroups_2024-Update
Kfl00103_0190 kfl00103_0190_v1.... (at5g24930 : 204.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.02 Orthogroups_2024-Update
LOC_Os02g08150 No alias CCT/B-box zinc finger protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os09g06464 No alias CCT/B-box zinc finger protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_7292g0010 No alias (at5g24930 : 245.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00045834-RA No alias (at5g24930 : 142.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.006G173600 No alias CONSTANS-like 5 0.03 Orthogroups_2024-Update
Pp1s364_5V6 No alias col3 gene for putative COSTANS-like 3 protein COL3 0.05 Orthogroups_2024-Update
Pp1s371_27V6 No alias col1 gene for putative CONSTANS-like 1 protein COL1 0.05 Orthogroups_2024-Update
Pp1s97_109V6 No alias col2 gene for putative CONSTANS-like 2 protein COL2 0.05 Orthogroups_2024-Update
Seita.1G228800.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G063200.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G211200.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G214000.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.04 Orthogroups_2024-Update
Solyc02g089540 No alias CONSTANS 1 0.03 Orthogroups_2024-Update
Solyc07g006630 No alias CONSTANS-like protein (AHRD V3.3 *** B2MW87_SOLLC) 0.15 Orthogroups_2024-Update
evm.model.contig_482.9 No alias (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010402 CCT_domain 305 347
IPR000315 Znf_B-box 25 61
IPR000315 Znf_B-box 60 106
No external refs found!