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  5. Bradi3g11290

Bradi3g11290


Description : Walls Are Thin 1


Gene families : OG_42_0001043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g11290
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Potri.002G029100 No alias Walls Are Thin 1 0.02 Orthogroups_2024-Update
Potri.005G233600 No alias Walls Are Thin 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000620 EamA_dom 188 325
IPR000620 EamA_dom 18 154
No external refs found!