Bradi3g15160


Description : phloem protein 2-B1


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g15160
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
271662 No alias phloem protein 2-A15 0.02 Orthogroups_2024-Update
A4A49_34028 No alias f-box protein pp2-b15 0.02 Orthogroups_2024-Update
At2g02300 No alias F-box protein PP2-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR1] 0.02 Orthogroups_2024-Update
Bradi3g54987 No alias phloem protein 2-B12 0.04 Orthogroups_2024-Update
Brara.A02261.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.B03095.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.B03101.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F00578.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F03423.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F03426.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H00998.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.10G169600 No alias phloem protein 2-B10 0.02 Orthogroups_2024-Update
Glyma.20G021200 No alias phloem protein 2-A1 0.03 Orthogroups_2024-Update
Glyma.20G220100 No alias phloem protein 2-B1 0.02 Orthogroups_2024-Update
HORVU4Hr1G021480.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G089430.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G012610.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g05480 No alias OsFBX261 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10434357g0020 No alias (at1g09155 : 177.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
MA_203210g0010 No alias (at1g09155 : 147.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
MA_227118g0010 No alias (at2g02340 : 82.4) phloem protein 2-B8 (PP2-B8);... 0.04 Orthogroups_2024-Update
MA_992082g0010 No alias (at2g02240 : 166.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
PSME_00005204-RA No alias (at2g02240 : 157.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
PSME_00005739-RA No alias (at2g02240 : 199.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
PSME_00052353-RA No alias (at2g02230 : 141.0) phloem protein 2-B1 (PP2-B1);... 0.02 Orthogroups_2024-Update
Potri.005G022100 No alias F-box family protein 0.04 Orthogroups_2024-Update
Pp1s106_35V6 No alias T27I15.150; F-box family protein / lectin-related... 0.02 Orthogroups_2024-Update
Seita.6G062000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G062100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G063500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G060500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G123700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G231200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G408000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G375400.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G341000.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G341100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g100000 No alias F-box protein (AHRD V3.3 *** W9RMP6_9ROSA) 0.03 Orthogroups_2024-Update
Solyc02g069020 No alias Phloem protein 2-like protein (AHRD V3.3 *** A0A103Y5W1_CYNCS) 0.03 Orthogroups_2024-Update
Sopen01g043520 No alias Phloem protein 2 0.03 Orthogroups_2024-Update
Sopen12g023290 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 20 63
IPR025886 PP2-like 125 302
No external refs found!