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  5. Bradi3g15650

Bradi3g15650


Description : RNA-binding CRS1 / YhbY (CRM) domain-containing protein


Gene families : OG_42_0001286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g15650
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
A4A49_15851 No alias crs2-associated factor 1, mitochondrial 0.02 Orthogroups_2024-Update
LOC_Os08g07790 No alias CRS2-associated factor 2, mitochondrial precursor,... 0.02 Orthogroups_2024-Update
PSME_00011060-RA No alias (at1g23400 : 167.0) Promotes the splicing of chloroplast... 0.02 Orthogroups_2024-Update
Seita.5G154500.1 No alias component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.02 Orthogroups_2024-Update
Seita.6G045700.1 No alias mCSF mitochondrial RNA splicing factor 0.07 Orthogroups_2024-Update
Solyc05g018240 No alias GSVIVT00005628001, HT7 (AHRD V3.3 *** A0A0A9GN13_ARUDO) 0.02 Orthogroups_2024-Update
Solyc11g066300 No alias CRS2-associated factor 1 (AHRD V3.3 *** A0A072TTL7_MEDTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 280 361
IPR001890 RNA-binding_CRM 172 243
No external refs found!