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  5. Bradi3g16080

Bradi3g16080


Description : Ankyrin repeat family protein


Gene families : OG_42_0000570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000570_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g16080
Cluster HCCA clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Bradi4g10350 No alias Ankyrin repeat family protein 0.05 Orthogroups_2024-Update
HORVU4Hr1G089890.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G125800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G046900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G122666.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 331 436
IPR026961 PGG_dom 476 587
IPR026961 PGG_dom 654 767
IPR026961 PGG_dom 24 128
IPR026961 PGG_dom 193 272
No external refs found!