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  5. Bradi3g16967

Bradi3g16967


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g16967
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
107359 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.G01986.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_131g0010 No alias (at4g02750 : 598.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_271639g0010 No alias (at4g02750 : 599.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_482767g0010 No alias (at2g22070 : 622.0) pentatricopeptide (PPR)... 0.05 Orthogroups_2024-Update
PSME_00007293-RA No alias (at4g02750 : 634.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Sobic.004G255300.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sopen09g029990 No alias PPR repeat family 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 384 408
IPR002885 Pentatricopeptide_repeat 179 206
IPR002885 Pentatricopeptide_repeat 147 171
IPR002885 Pentatricopeptide_repeat 83 108
IPR002885 Pentatricopeptide_repeat 117 144
IPR002885 Pentatricopeptide_repeat 209 256
IPR002885 Pentatricopeptide_repeat 310 356
IPR032867 DYW_dom 483 607
IPR002885 Pentatricopeptide_repeat 284 307
No external refs found!