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  5. Bradi3g17187

Bradi3g17187


Description : photosynthetic electron transfer A


Gene families : OG_42_0003217 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003217_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g17187
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
236857 No alias photosynthetic electron transfer A 0.03 Orthogroups_2024-Update
Bradi1g39211 No alias photosynthetic electron transfer A 0.05 Orthogroups_2024-Update
HORVU3Hr1G019030.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G019040.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.J013000.1 No alias apocytochrome f component *(PetA) of cytochrome b6/f complex 0.03 Orthogroups_2024-Update
Seita.J021300.1 No alias apocytochrome f component *(PetA) of cytochrome b6/f complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0009055 electron transfer activity IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
CC GO:0031361 integral component of thylakoid membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR024094 Cyt_f_lg_dom 36 190
IPR002325 Cyt_f 202 320
No external refs found!