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  5. Bradi3g17316

Bradi3g17316


Description : RmlC-like cupins superfamily protein


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g17316
Cluster HCCA clusters: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
109767 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
109968 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
109995 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
227274 No alias Function unknown 0.03 Orthogroups_2024-Update
229376 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
229747 No alias germin-like protein 5 0.03 Orthogroups_2024-Update
428138 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
92738 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
A4A49_30960 No alias nectarin-1 0.03 Orthogroups_2024-Update
Bradi1g04907 No alias germin-like protein subfamily 2 member 2 precursor 0.04 Orthogroups_2024-Update
Bradi3g15230 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g15240 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g43490 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00896.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU0Hr1G009390.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G005440.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00516_0050 kfl00516_0050_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
Kfl00516_0055 kfl00516_0055_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
MA_10308226g0010 No alias (at1g09560 : 231.0) germin-like protein (GLP5);... 0.02 Orthogroups_2024-Update
MA_5449g0010 No alias (at3g10080 : 224.0) RmlC-like cupins superfamily... 0.02 Orthogroups_2024-Update
Potri.002G184900 No alias germin-like protein 10 0.02 Orthogroups_2024-Update
Potri.004G179800 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G162600 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G180600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G250700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G129700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g088260 No alias Germin-like protein (AHRD V3.3 *** B7U512_MAIZE) 0.02 Orthogroups_2024-Update
Sopen01g035090 No alias Cupin 0.03 Orthogroups_2024-Update
Sopen01g035100 No alias Cupin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 66 209
No external refs found!