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  5. Bradi3g17490

Bradi3g17490


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g17490
Cluster HCCA clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G012590.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g09580 No alias OsFBX39 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g29740 No alias OsFBX197 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g05460 No alias OsFBL40 - F-box domain and LRR containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g03760 No alias OsFBX350 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.3G059100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G067900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G052300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 35 74
No external refs found!