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  5. Bradi3g17880

Bradi3g17880


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g17880

Target Alias Description ECC score Gene Family Method Actions
A4A49_03685 No alias putative pectinesterase 53 0.02 Orthogroups_2024-Update
At3g24130 No alias Probable pectinesterase 29... 0.02 Orthogroups_2024-Update
Brara.C03630.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
HORVU1Hr1G075860.1 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
HORVU7Hr1G076580.1 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
LOC_Os05g44600 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g45730 No alias pectinesterase, putative, expressed 0.01 Orthogroups_2024-Update
MA_304854g0010 No alias (at2g21610 : 347.0) pectinesterase 11 (PE11); FUNCTIONS... 0.01 Orthogroups_2024-Update
MA_87592g0010 No alias (at2g21610 : 332.0) pectinesterase 11 (PE11); FUNCTIONS... 0.01 Orthogroups_2024-Update
PSME_00008575-RA No alias (at5g19730 : 276.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00008576-RA No alias (at5g19730 : 291.0) Pectin lyase-like superfamily... 0.05 Orthogroups_2024-Update
PSME_00019845-RA No alias (at2g21610 : 304.0) pectinesterase 11 (PE11); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00020050-RA No alias (at2g21610 : 321.0) pectinesterase 11 (PE11); FUNCTIONS... 0.01 Orthogroups_2024-Update
Potri.008G104800 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
Solyc10g083810 No alias No description available 0.02 Orthogroups_2024-Update
Sopen07g033560 No alias Pectinesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 85 377
No external refs found!