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  5. Bradi3g18572

Bradi3g18572


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g18572
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G014030.2 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os10g35240 No alias Rf1, mitochondrial precursor, putative, expressed 0.02 Orthogroups_2024-Update
Seita.8G161400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G011000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G024600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G028300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G168000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G087900.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 450 479
IPR002885 Pentatricopeptide_repeat 101 126
IPR002885 Pentatricopeptide_repeat 352 382
IPR002885 Pentatricopeptide_repeat 494 519
IPR002885 Pentatricopeptide_repeat 279 328
IPR002885 Pentatricopeptide_repeat 525 573
IPR002885 Pentatricopeptide_repeat 665 711
IPR002885 Pentatricopeptide_repeat 137 185
IPR002885 Pentatricopeptide_repeat 210 258
IPR002885 Pentatricopeptide_repeat 601 643
IPR002885 Pentatricopeptide_repeat 384 433
No external refs found!