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  5. Bradi3g19477

Bradi3g19477


Description : F-box/RNI-like superfamily protein


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g19477
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g36220 No alias OsFBX198 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g09740 No alias OsFBX274 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g03910 No alias OsFBX354 - F-box domain containing protein, expressed 0.04 Orthogroups_2024-Update
Seita.9G299400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G078700.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G079201.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G072100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G174600.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 81 117
No external refs found!