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  5. Bradi3g20060

Bradi3g20060


Description : Calcium-dependent lipid-binding (CaLB domain) family protein


Gene families : OG_42_0000345 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g20060
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
81096 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 Orthogroups_2024-Update
Bradi3g12250 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 Orthogroups_2024-Update
Brara.J00373.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre01.g044600 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.01 Orthogroups_2024-Update
HORVU5Hr1G084010.1 No alias membrane tethering protein (SYT1) of... 0.03 Orthogroups_2024-Update
LOC_Os07g22640 No alias lipid binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.6G109700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G109800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g094030 No alias CLB1 0.02 Orthogroups_2024-Update
Solyc12g009790 No alias Calcium-dependent lipid-binding (CaLB domain) family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 10 188
IPR000008 C2_dom 201 305
IPR000008 C2_dom 372 466
No external refs found!