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  5. Sopen07g004030

Sopen07g004030


Description : Non-repetitive/WGA-negative nucleoporin C-terminal


Gene families : OG_42_0004588 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004588_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g004030
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cre09.g394350 No alias nucleoporin 155 0.03 Orthogroups_2024-Update
HORVU4Hr1G066730.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP155) 0.04 Orthogroups_2024-Update
Pp1s35_255V6 No alias nucleoporin 155 0.02 Orthogroups_2024-Update
Seita.7G105700.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP155) 0.06 Orthogroups_2024-Update
Sobic.001G451300.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP155) 0.05 Orthogroups_2024-Update
Solyc07g008160 No alias Nuclear pore complex protein Nup155 (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR014908 Nucleoporin_Nup133/Nup155_N 54 543
IPR007187 Nucleoporin_Nup133/Nup155_C 874 1287
No external refs found!