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  5. Bradi3g21175

Bradi3g21175


Description : DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding


Gene families : OG_42_0000127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g21175
Cluster HCCA clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Bradi1g04288 No alias F-box family protein 0.03 Orthogroups_2024-Update
Bradi1g70312 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g01037 No alias F-box family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G121970.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os06g13960 No alias OsFBX194 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g02890 No alias OsFBX209 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.9G196300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G112200.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
InterPro domains Description Start Stop
IPR003169 GYF 400 439
IPR001810 F-box_dom 14 45
No external refs found!