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  5. Bradi3g21421

Bradi3g21421


Description : Ribonuclease H-like superfamily protein


Gene families : OG_42_0000180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g21421
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Bradi3g57305 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.03 Orthogroups_2024-Update
LOC_Os02g06750 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 416 506
IPR026960 RVT-Znf 191 289
No external refs found!