Bradi3g21480

Description : homeobox from Arabidopsis thaliana

Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g21480
Cluster	HCCA clusters: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
139631	No alias	homeobox from Arabidopsis thaliana	0.02	Orthogroups_2024-Update
At5g47370	No alias	Homeobox-leucine zipper protein HAT2...	0.03	Orthogroups_2024-Update
Bradi3g03970	No alias	homeobox from Arabidopsis thaliana	0.02	Orthogroups_2024-Update
Brara.A01857.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02018.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G106276	No alias	homeobox from Arabidopsis thaliana	0.02	Orthogroups_2024-Update
Glyma.01G196600	No alias	Homeobox-leucine zipper protein family	0.03	Orthogroups_2024-Update
Glyma.05G062700	No alias	homeobox protein 2	0.04	Orthogroups_2024-Update
Glyma.05G109500	No alias	Homeobox-leucine zipper protein family	0.03	Orthogroups_2024-Update
Glyma.15G168800	No alias	homeobox from Arabidopsis thaliana	0.02	Orthogroups_2024-Update
HORVU5Hr1G049790.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
HORVU7Hr1G098230.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os03g12860	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
MA_60457g0010	No alias	(at5g06710 : 208.0) Homeobox-leucine zipper protein.;...	0.03	Orthogroups_2024-Update
PSME_00018809-RA	No alias	(at5g06710 : 140.0) Homeobox-leucine zipper protein.;...	0.02	Orthogroups_2024-Update
PSME_00022003-RA	No alias	(at4g37790 : 231.0) Encodes homeobox protein HAT22,...	0.03	Orthogroups_2024-Update
PSME_00038042-RA	No alias	(at5g06710 : 121.0) Homeobox-leucine zipper protein.;...	0.03	Orthogroups_2024-Update
Potri.002G113400	No alias	Homeobox-leucine zipper protein family	0.04	Orthogroups_2024-Update
Potri.014G045100	No alias	homeobox-leucine zipper protein 3	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predicted GO
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predicted GO
MF	GO:0004575	sucrose alpha-glucosidase activity	IEP	Predicted GO
BP	GO:0006534	cysteine metabolic process	IEP	Predicted GO
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Predicted GO
BP	GO:0006563	L-serine metabolic process	IEP	Predicted GO
MF	GO:0008198	ferrous iron binding	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Predicted GO
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0015926	glucosidase activity	IEP	Predicted GO
MF	GO:0016407	acetyltransferase activity	IEP	Predicted GO
MF	GO:0016412	serine O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016413	O-acetyltransferase activity	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
BP	GO:0018208	peptidyl-proline modification	IEP	Predicted GO
BP	GO:0019344	cysteine biosynthetic process	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
MF	GO:0090599	alpha-glucosidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	153	185
IPR001356	Homeobox_dom	97	151

External Links

No external refs found!

Bradi3g21480

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation