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  5. Bradi3g23000

Bradi3g23000


Description : MATE efflux family protein


Gene families : OG_42_0005952 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005952_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g23000
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14350 No alias MATE efflux family protein 0.04 Orthogroups_2024-Update
GRMZM2G027016 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G117540.3 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
HORVU3Hr1G014320.2 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
LOC_Os01g56050 No alias MATE efflux family protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0007050 cell cycle arrest IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 243 404
IPR002528 MATE_fam 21 182
No external refs found!