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  5. Bradi3g24000

Bradi3g24000


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g24000
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
409196 No alias related to AP2 11 0.02 Orthogroups_2024-Update
69413 No alias DREB and EAR motif protein 3 0.04 Orthogroups_2024-Update
A4A49_03112 No alias ethylene-responsive transcription factor crf4 0.02 Orthogroups_2024-Update
A4A49_11348 No alias ethylene-responsive transcription factor erf010 0.03 Orthogroups_2024-Update
A4A49_13998 No alias ethylene-responsive transcription factor 4 0.02 Orthogroups_2024-Update
A4A49_16244 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_20188 No alias ethylene-responsive transcription factor erf062 0.03 Orthogroups_2024-Update
A4A49_24642 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_28228 No alias ethylene-responsive transcription factor erf017 0.02 Orthogroups_2024-Update
A4A49_33000 No alias ethylene-responsive transcription factor 14 0.02 Orthogroups_2024-Update
A4A49_35180 No alias ethylene-responsive transcription factor 1b 0.02 Orthogroups_2024-Update
A4A49_38622 No alias dehydration-responsive element-binding protein 3 0.02 Orthogroups_2024-Update
A4A49_42088 No alias ethylene-responsive transcription factor 13 0.02 Orthogroups_2024-Update
A4A49_42290 No alias ethylene-responsive transcription factor rap2-4 0.02 Orthogroups_2024-Update
AC198403.3_FG001 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
At1g22985 No alias CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874] 0.03 Orthogroups_2024-Update
At1g77200 No alias Ethylene-responsive transcription factor ERF037... 0.02 Orthogroups_2024-Update
At2g40220 No alias Ethylene-responsive transcription factor ABI4... 0.03 Orthogroups_2024-Update
At4g17500 No alias Ethylene-responsive transcription factor 1A... 0.02 Orthogroups_2024-Update
At5g25190 No alias Ethylene-responsive transcription factor ERF003... 0.04 Orthogroups_2024-Update
Bradi3g12680 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g17640 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Bradi5g24110 No alias related to AP2 10 0.03 Orthogroups_2024-Update
Brara.B03764.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.D02449.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.E00692.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Brara.E02969.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.F01050.1 No alias cutin and suberin biosynthesis transcription factor... 0.02 Orthogroups_2024-Update
Brara.H01496.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.I01326.1 No alias subgroup ERF-I transcription factor 0.05 Orthogroups_2024-Update
Brara.I01983.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Brara.I04175.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.I05105.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G061487 No alias related to AP2 4 0.03 Orthogroups_2024-Update
GRMZM2G066158 No alias ERF domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G069082 No alias C-repeat-binding factor 4 0.03 Orthogroups_2024-Update
GRMZM2G169382 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G173771 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
GRMZM2G175543 No alias ethylene responsive element binding factor 4 0.02 Orthogroups_2024-Update
Glyma.03G112700 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.04G041200 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
Glyma.04G217400 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G205600 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.16G023800 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G145400 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Glyma.18G091600 No alias ethylene responsive element binding factor 3 0.03 Orthogroups_2024-Update
Glyma.18G252300 No alias ethylene-responsive element binding factor 13 0.1 Orthogroups_2024-Update
Glyma.19G262700 No alias related to AP2 2 0.04 Orthogroups_2024-Update
Glyma.20G070100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G055710.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G015350.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G090800.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.04 Orthogroups_2024-Update
LOC_Os02g34260 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g51670 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g08490 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g60120 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g34970 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g43210 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g11460 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g39810 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_100577g0010 No alias (at5g21960 : 112.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_1037g0020 No alias (at1g74930 : 134.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_10431529g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10432141g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_10433310g0010 No alias (at5g11590 : 108.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_12547g0010 No alias (at5g25810 : 85.9) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_164803g0010 No alias (at5g11590 : 119.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_203191g0010 No alias (at1g28360 : 85.9) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_4032g0010 No alias (q9sxs8|erf3_tobac : 85.1) Ethylene-responsive... 0.04 Orthogroups_2024-Update
MA_40338g0010 No alias (at1g21910 : 84.7) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_5805979g0010 No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.06 Orthogroups_2024-Update
MA_6305g0010 No alias (at5g21960 : 127.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_65190g0010 No alias (at5g19790 : 91.3) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_65877g0010 No alias (at3g16280 : 101.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_69434g0020 No alias (q40479|erf2_tobac : 84.0) Ethylene-responsive... 0.04 Orthogroups_2024-Update
MA_922309g0010 No alias (at4g17500 : 92.0) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_9905g0010 No alias (at4g17500 : 100.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
PSME_00005185-RA No alias (at4g17500 : 105.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00014384-RA No alias (at5g21960 : 93.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00022946-RA No alias (at5g61890 : 105.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00036243-RA No alias (at5g11590 : 104.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00037661-RA No alias (at4g17500 : 149.0) Encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00048384-RA No alias (at5g11190 : 113.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
PSME_00052455-RA No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00056166-RA No alias (at5g11590 : 103.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.001G154200 No alias ethylene responsive element binding factor 5 0.02 Orthogroups_2024-Update
Potri.002G094200 No alias related to AP2 4 0.02 Orthogroups_2024-Update
Potri.002G141200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.004G187001 No alias C-repeat/DRE binding factor 2 0.03 Orthogroups_2024-Update
Potri.005G195000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G138800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G091300 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Potri.010G006800 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
Potri.011G061700 No alias ethylene response factor 1 0.04 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G131300 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Pp1s38_262V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G257300.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.1G259200.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.2G138400.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.2G269600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G430400.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Seita.4G039700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G235100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G080300.1 No alias subgroup ERF-X transcription factor 0.06 Orthogroups_2024-Update
Seita.7G232100.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Seita.9G516500.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G169400.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Sobic.001G296300.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G481600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G502300.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G115400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G442100.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G171300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G297100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G014800.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.04 Orthogroups_2024-Update
Sobic.006G170100.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G240500.1 No alias subgroup ERF-II-DEAR transcription factor 0.05 Orthogroups_2024-Update
Sobic.009G170800.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Solyc03g007460 No alias Solanum lycopersicum Cytokinin Response Factor 4 0.03 Orthogroups_2024-Update
Solyc03g093530 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Solyc03g116610 No alias Ethylene-responsive transcription factor WIN1 (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc03g118190 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc04g012050 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.06 Orthogroups_2024-Update
Solyc04g054910 No alias Ethylene-responsive element binding-factor (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc04g071770 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc04g078640 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc05g051200 No alias ethylene-responsive factor 1 0.03 Orthogroups_2024-Update
Solyc05g052030 No alias ethylene response factor 4 0.03 Orthogroups_2024-Update
Solyc08g007230 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc08g080290 No alias Dehydration responsive element binding transcription... 0.03 Orthogroups_2024-Update
Sopen00g003270 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen02g022270 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen02g033000 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen02g035400 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen02g037700 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen03g005150 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen03g041270 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen07g027720 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen07g033090 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen12g001920 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 89 137
No external refs found!