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  5. Bradi3g24410

Bradi3g24410


Description : Glycosyl hydrolase family 10 protein


Gene families : OG_42_0000885 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000885_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g24410
Cluster HCCA clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
A4A49_26378 No alias hypothetical protein 0.02 Orthogroups_2024-Update
A4A49_33607 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At2g14690 No alias 1,4-beta-xylan endohydrolase [Source:UniProtKB/TrEMBL;Acc:Q680B7] 0.02 Orthogroups_2024-Update
Glyma.06G004400 No alias Glycosyl hydrolase family 10 protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G023120.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00001029-RA No alias (at4g38650 : 553.0) Glycosyl hydrolase family 10... 0.03 Orthogroups_2024-Update
Seita.9G273800.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001000 GH10 242 482
No external refs found!