Sopen07g004450


Description : tRNA synthetases class I (W and Y)


Gene families : OG_42_0005753 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005753_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g004450
Cluster HCCA clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G202100 No alias Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial 0.02 Orthogroups_2024-Update
Seita.9G225300.1 No alias organellar tyrosine-tRNA ligase 0.04 Orthogroups_2024-Update
Solyc07g008530 No alias Tyrosine--tRNA ligase (AHRD V3.3 *** K4CBX2_SOLLC) 0.03 Orthogroups_2024-Update
evm.model.tig00001388.17 No alias (at3g02660 : 268.0) EMBRYO DEFECTIVE 2768 (emb2768);... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 461 505
IPR002305 aa-tRNA-synth_Ic 112 423
No external refs found!