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  5. Sopen07g004530

Sopen07g004530


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g004530
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
A4A49_38013 No alias lrr receptor-like serinethreonine-protein kinase gso2 0.03 Orthogroups_2024-Update
Bradi4g16186 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU4Hr1G001070.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G006350.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os11g35850 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.001G043800 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Seita.8G069600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G237800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G030000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 154 214
IPR001611 Leu-rich_rpt 354 413
IPR001611 Leu-rich_rpt 426 483
IPR001611 Leu-rich_rpt 256 314
IPR013210 LRR_N_plant-typ 24 60
IPR001611 Leu-rich_rpt 761 781
IPR001611 Leu-rich_rpt 830 849
IPR001611 Leu-rich_rpt 101 117
No external refs found!