1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen07g004540

Sopen07g004540


Description : Leucine rich repeat


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g004540
Cluster HCCA clusters: Cluster_385

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G228600 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Glyma.16G129300 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Glyma.16G174600 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Glyma.16G175000 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Potri.015G025200 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 553 567
IPR001611 Leu-rich_rpt 111 125
IPR001611 Leu-rich_rpt 136 193
IPR001611 Leu-rich_rpt 263 321
IPR001611 Leu-rich_rpt 361 420
IPR013210 LRR_N_plant-typ 44 80
IPR001611 Leu-rich_rpt 744 765
No external refs found!