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  5. Bradi3g27067

Bradi3g27067


Description : BTB-POZ and MATH domain 2


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g27067
Cluster HCCA clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
At5g19000 No alias BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0] 0.03 Orthogroups_2024-Update
Bradi3g18370 No alias BTB-POZ and MATH domain 2 0.03 Orthogroups_2024-Update
Bradi3g40777 No alias BTB-POZ and MATH domain 1 0.04 Orthogroups_2024-Update
HORVU3Hr1G081650.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G107980.3 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os08g03500 No alias MBTB17 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.02 Orthogroups_2024-Update
LOC_Os10g29100 No alias MBTB44 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
Sobic.007G199600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc05g052960 No alias BTB-POZ and MATH domain protein (AHRD V3.3 *** B9VXZ7_CAPAN) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 183 292
IPR002083 MATH/TRAF_dom 47 154
No external refs found!