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  5. Sopen07g004560

Sopen07g004560


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g004560
Cluster HCCA clusters: Cluster_336

Target Alias Description ECC score Gene Family Method Actions
Bradi3g05292 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Bradi4g16234 No alias receptor like protein 11 0.02 Orthogroups_2024-Update
Glyma.16G174500 No alias receptor like protein 2 0.03 Orthogroups_2024-Update
HORVU6Hr1G009100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os11g35550 No alias Leucine Rich Repeat family protein, expressed 0.02 Orthogroups_2024-Update
PSME_00042480-RA No alias (at2g34930 : 87.8) disease resistance family protein /... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 538 559
IPR001611 Leu-rich_rpt 144 202
IPR001611 Leu-rich_rpt 271 330
IPR001611 Leu-rich_rpt 419 476
IPR013210 LRR_N_plant-typ 36 77
No external refs found!