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  5. Bradi3g27085

Bradi3g27085


Description : BTB-POZ and MATH domain 1


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g27085
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61167 No alias BTB-POZ and MATH domain 2 0.04 Orthogroups_2024-Update
Bradi3g27081 No alias BTB-POZ and MATH domain 2 0.03 Orthogroups_2024-Update
Bradi4g12915 No alias BTB-POZ and MATH domain 2 0.03 Orthogroups_2024-Update
Bradi4g23825 No alias BTB-POZ and MATH domain 1 0.02 Orthogroups_2024-Update
HORVU5Hr1G108760.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G108800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G246600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G190900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G038300.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 196 252
IPR002083 MATH/TRAF_dom 40 147
No external refs found!