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  5. Bradi3g27286

Bradi3g27286


Description : photosystem II reaction center protein B


Gene families : OG_42_0002336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g27286
Cluster HCCA clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
137729 No alias photosystem II reaction center protein B 0.04 Orthogroups_2024-Update
Bradi1g05740 No alias photosystem II reaction center protein B 0.07 Orthogroups_2024-Update
Bradi1g05741 No alias photosystem II reaction center protein B 0.03 Orthogroups_2024-Update
Bradi5g09702 No alias photosystem II reaction center protein B 0.06 Orthogroups_2024-Update
Bradi5g23854 No alias photosystem II reaction center protein B 0.03 Orthogroups_2024-Update
HORVU0Hr1G029910.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os10g21310 No alias photosystem II P680 chlorophyll A apoprotein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00001743-RA No alias (p41624|psbb_pinth : 223.0) Photosystem II P680... 0.03 Orthogroups_2024-Update
Seita.J014000.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.003G169100.1 No alias component *(PsbB/CP47) of PS-II reaction center complex 0.04 Orthogroups_2024-Update
Sobic.003G172200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc01g007500 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEA InterProScan predictions
BP GO:0009767 photosynthetic electron transport chain IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016168 chlorophyll binding IEA InterProScan predictions
BP GO:0019684 photosynthesis, light reaction IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Predicted GO
CC GO:0031360 intrinsic component of thylakoid membrane IEP Predicted GO
CC GO:0031361 integral component of thylakoid membrane IEP Predicted GO
BP GO:0031647 regulation of protein stability IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0042301 phosphate ion binding IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0050821 protein stabilization IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000932 PS_antenna-like 1 256
No external refs found!