1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen07g004610

Sopen07g004610


Description : Terpene synthase family, metal binding domain


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g004610
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G038153 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os08g07120 No alias terpene synthase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G415100 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
Solyc01g101210 No alias viridiflorene synthase 0.03 Orthogroups_2024-Update
Solyc06g059910 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g059930 No alias sesquiterpene synthase 1 0.03 Orthogroups_2024-Update
Solyc07g052120 No alias Sesquiterpene synthase (AHRD V3.3 *-* G8H5N2_SOLHA) 0.03 Orthogroups_2024-Update
Solyc12g006570 No alias Sesquiterpene synthase (AHRD V3.3 *** G5CV52_SOLLC) 0.03 Orthogroups_2024-Update
Sopen06g020040 No alias Terpene synthase family, metal binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 28 130
IPR005630 Terpene_synthase_metal-bd 128 324
No external refs found!