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  5. Sopen07g004620

Sopen07g004620


Description : MULE transposase domain


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g004620
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Brara.H01299.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G106653 No alias FAR1-related sequence 6 0.02 Orthogroups_2024-Update
HORVU4Hr1G002250.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g27400 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g45530 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g12380 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.003G207100 No alias FAR1-related sequence 4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 351 378
IPR018289 MULE_transposase_dom 62 152
No external refs found!