Bradi3g28350

Description : cellulose synthase A4

Gene families : OG_42_0000159 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g28350
Cluster	HCCA clusters: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
141535	No alias	cellulose synthase 1	0.04	Orthogroups_2024-Update
163575	No alias	Cellulose synthase family protein	0.03	Orthogroups_2024-Update
75715	No alias	Cellulose synthase family protein	0.02	Orthogroups_2024-Update
A4A49_16242	No alias	putative cellulose synthase a catalytic subunit 3 [udp-forming]	0.03	Orthogroups_2024-Update
At4g15290	No alias	Glycosyltransferase (Fragment)...	0.02	Orthogroups_2024-Update
At4g18780	No alias	Cellulose synthase (Fragment)...	0.03	Orthogroups_2024-Update
At4g32410	No alias	Cellulose synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UWT4]	0.03	Orthogroups_2024-Update
At5g17420	No alias	Cellulose synthase (Fragment)...	0.03	Orthogroups_2024-Update
At5g44030	No alias	cellulose synthase A4 [Source:TAIR;Acc:AT5G44030]	0.04	Orthogroups_2024-Update
Bradi1g53207	No alias	cellulose synthase 6	0.03	Orthogroups_2024-Update
Bradi5g10130	No alias	cellulose synthase-like B4	0.03	Orthogroups_2024-Update
Brara.B00165.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.03	Orthogroups_2024-Update
Brara.B00711.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.03	Orthogroups_2024-Update
Brara.C00769.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.04	Orthogroups_2024-Update
Brara.D01969.1	No alias	glycosyltransferase *(CSLB/CSLH)	0.03	Orthogroups_2024-Update
Brara.F03770.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.05	Orthogroups_2024-Update
Brara.K00426.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.04	Orthogroups_2024-Update
GRMZM2G445905	No alias	cellulose synthase A4	0.02	Orthogroups_2024-Update
Glyma.05G187300	No alias	cellulose synthase 6	0.03	Orthogroups_2024-Update
Glyma.06G065000	No alias	cellulose synthase family protein	0.04	Orthogroups_2024-Update
Glyma.08G088400	No alias	cellulose synthase A4	0.04	Orthogroups_2024-Update
Glyma.09G103000	No alias	Cellulose synthase family protein	0.04	Orthogroups_2024-Update
Glyma.12G096900	No alias	cellulose synthase-like B3	0.03	Orthogroups_2024-Update
Glyma.13G202500	No alias	Cellulose synthase family protein	0.02	Orthogroups_2024-Update
Glyma.13G310300	No alias	cellulose synthase-like B3	0.03	Orthogroups_2024-Update
Kfl00459_0080	kfl00459_0080_v1.1	(at4g32410 : 1050.0) Encodes a cellulose synthase...	0.01	Orthogroups_2024-Update
PSME_00003324-RA	No alias	(at5g44030 : 1405.0) Encodes a cellulose synthase...	0.07	Orthogroups_2024-Update
PSME_00003722-RA	No alias	(at4g18780 : 1327.0) Encodes a member of the cellulose...	0.05	Orthogroups_2024-Update
PSME_00015179-RA	No alias	(at5g17420 : 1472.0) Encodes a xylem-specific cellulose...	0.07	Orthogroups_2024-Update
Potri.002G257900	No alias	cellulose synthase A4	0.06	Orthogroups_2024-Update
Potri.004G059600	No alias	cellulose synthase family protein	0.07	Orthogroups_2024-Update
Potri.006G052600	No alias	Cellulose synthase family protein	0.04	Orthogroups_2024-Update
Potri.006G181900	No alias	Cellulose synthase family protein	0.08	Orthogroups_2024-Update
Potri.013G019800	No alias	cellulose synthase A9	0.03	Orthogroups_2024-Update
Potri.018G029400	No alias	cellulose synthase 1	0.03	Orthogroups_2024-Update
Pp1s112_75V6	No alias	cellulose synthase glycosyltransferase family 2	0.02	Orthogroups_2024-Update
Seita.2G080900.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.05	Orthogroups_2024-Update
Seita.2G099400.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.06	Orthogroups_2024-Update
Seita.2G115400.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.05	Orthogroups_2024-Update
Seita.3G102600.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.05	Orthogroups_2024-Update
Seita.4G213700.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.04	Orthogroups_2024-Update
Seita.5G319100.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.06	Orthogroups_2024-Update
Seita.9G227400.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.04	Orthogroups_2024-Update
Sobic.001G224300.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.07	Orthogroups_2024-Update
Sobic.002G075500.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.04	Orthogroups_2024-Update
Sobic.002G205500.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.07	Orthogroups_2024-Update
Sobic.003G296400.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.08	Orthogroups_2024-Update
Solyc04g071650	No alias	Cellulose synthase (AHRD V3.3 *** M1A8I3_SOLTU)	0.03	Orthogroups_2024-Update
Solyc09g072820	No alias	Cellulose synthase (AHRD V3.3 *** M5VVD4_PRUPE)	0.07	Orthogroups_2024-Update
Solyc12g056580	No alias	Cellulose synthase (AHRD V3.3 *** M1AQH6_SOLTU)	0.02	Orthogroups_2024-Update
Sopen04g027640	No alias	Cellulose synthase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	InterProScan predictions
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	InterProScan predictions
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
MF	GO:0004568	chitinase activity	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	285	1038
IPR027934	CES_Znf_RING	11	80

External Links

No external refs found!

Bradi3g28350

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation