Bradi3g32090

Description : AGAMOUS-like 20

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g32090
Cluster	HCCA clusters: Cluster_250

Target	Alias	Description	ECC score	Gene Family Method
A4A49_18078	No alias	developmental protein sepallata 1	0.04	Orthogroups_2024-Update
A4A49_18989	No alias	agamous-like mads-box protein agl19	0.02	Orthogroups_2024-Update
At5g51860	No alias	MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5]	0.06	Orthogroups_2024-Update
Brara.B03740.1	No alias	regulatory protein *(AP1/CAL/FUL) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.C00925.1	No alias	component *(PISTILLATA) of AP3-PISTILLATA organ-identity...	0.04	Orthogroups_2024-Update
Brara.G00861.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.J00749.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G018589	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
GRMZM2G133568	No alias	AGAMOUS-like 16	0.03	Orthogroups_2024-Update
Glyma.01G064100	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.03G019300	No alias	AGAMOUS-like 20	0.03	Orthogroups_2024-Update
Glyma.04G043800	No alias	AGAMOUS-like 66	0.05	Orthogroups_2024-Update
Glyma.15G088600	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G008300.3	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G002270.1	No alias	MADS/AGL-type transcription factor	0.06	Orthogroups_2024-Update
Kfl00560_0030	kfl00560_0030_v1....	(q40872\|ag_pangi : 148.0) Floral homeotic protein...	0.03	Orthogroups_2024-Update
LOC_Os04g38780	No alias	transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
Potri.004G002400	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Potri.005G150501	No alias	AGAMOUS-like 16	0.02	Orthogroups_2024-Update
Potri.014G021000	No alias	Function unknown	0.03	Orthogroups_2024-Update
Pp1s163_73V6	No alias	mikc* mads-box transcription factor	0.03	Orthogroups_2024-Update
Pp1s267_56V6	No alias	agamous-like protein	0.03	Orthogroups_2024-Update
Pp1s55_280V6	No alias	mikc* mads-box transcription factor	0.03	Orthogroups_2024-Update
Seita.1G308200.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Seita.6G223400.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Solyc01g060300	No alias	damaged DNA binding 2 (AHRD V3.3 --* AT5G58760.2)	0.03	Orthogroups_2024-Update
Solyc01g093960	No alias	MADS-box transcription factor (AHRD V3.3 *** A0A072TNM9_MEDTR)	0.04	Orthogroups_2024-Update
Solyc01g106170	No alias	AGAMOUS-like MADS-box transcription factor (AHRD V3.3...	0.04	Orthogroups_2024-Update
Solyc08g067230	No alias	MADS box transcription factor (AHRD V3.3 *** G3EIU8_9SOLA)	0.04	Orthogroups_2024-Update
Sopen02g034000	No alias	K-box region	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predicted GO
MF	GO:0051540	metal cluster binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	83	170
IPR002100	TF_MADSbox	10	57

External Links

No external refs found!

Bradi3g32090

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation