Bradi3g32520

Description : zinc knuckle (CCHC-type) family protein

Gene families : OG_42_0005846 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005846_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g32520
Cluster	HCCA clusters: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
PSME_00038677-RA	No alias	(at1g75560 : 300.0) zinc knuckle (CCHC-type) family...	0.03	Orthogroups_2024-Update
Potri.005G234700	No alias	zinc knuckle (CCHC-type) family protein	0.02	Orthogroups_2024-Update
Sobic.001G309100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006801	superoxide metabolic process	IEP	Predicted GO
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	124	140
IPR001878	Znf_CCHC	98	113
IPR001878	Znf_CCHC	60	75
IPR001878	Znf_CCHC	42	57
IPR001878	Znf_CCHC	79	95
IPR001878	Znf_CCHC	221	236
IPR001878	Znf_CCHC	143	159

External Links

No external refs found!