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  5. Bradi3g33140

Bradi3g33140


Description : expansin B2


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g33140
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Bradi1g13787 No alias expansin B4 0.02 Orthogroups_2024-Update
Brara.E00483.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G054230.7 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00025248-RA No alias (q6h676|exb11_orysa : 171.0) Expansin-B11 precursor... 0.02 Orthogroups_2024-Update
PSME_00039735-RA No alias (at2g20750 : 156.0) member of BETA-EXPANSINS. Naming... 0.02 Orthogroups_2024-Update
PSME_00048195-RA No alias (q7xt40|exb15_orysa : 117.0) Expansin-B15 precursor... 0.02 Orthogroups_2024-Update
Seita.2G122800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G327000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G301000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 163 248
IPR009009 RlpA-like_DPBB 71 150
No external refs found!