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  5. Bradi3g33160

Bradi3g33160


Description : expansin B2


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g33160
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
A4A49_20975 No alias putative expansin-b2 0.02 Orthogroups_2024-Update
At4g28250 No alias EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9] 0.05 Orthogroups_2024-Update
Bradi1g78350 No alias expansin B2 0.02 Orthogroups_2024-Update
HORVU6Hr1G060410.2 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os10g40730 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00025248-RA No alias (q6h676|exb11_orysa : 171.0) Expansin-B11 precursor... 0.02 Orthogroups_2024-Update
Pp1s100_99V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Seita.9G157100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g054170 No alias expansin B3 (AHRD V3.3 *** AT4G28250.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 181 268
IPR009009 RlpA-like_DPBB 90 168
No external refs found!