Sopen07g005470

Description : Alpha amylase, catalytic domain

Gene families : OG_42_0001338 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g005470
Cluster	HCCA clusters: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method	Actions
At4g09020	No alias	Isoamylase 3, chloroplastic...	0.02	Orthogroups_2024-Update
Mp3g09040.1	No alias	starch debranching enzyme. starch-debranching...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	InterProScan predictions
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004193	Glyco_hydro_13_N	474	568
IPR006047	Glyco_hydro_13_cat_dom	638	744
IPR013103	RVT_2	185	251

External Links

No external refs found!