1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi3g34688

Bradi3g34688


Description : carotenoid cleavage dioxygenase 1


Gene families : OG_42_0002892 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g34688
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Potri.006G239301 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
Sopen08g020690 No alias Retinal pigment epithelial membrane protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
CC GO:0030677 ribonuclease P complex IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 166 328
IPR004294 Carotenoid_Oase 331 537
No external refs found!