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  5. Bradi3g35067

Bradi3g35067


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g35067
Cluster HCCA clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
At5g44390 No alias Berberine bridge enzyme-like 25... 0.03 Orthogroups_2024-Update
GRMZM2G173105 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.06G321600 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080900 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
PSME_00036068-RA No alias (at1g30760 : 377.0) FAD-binding Berberine family... 0.06 Orthogroups_2024-Update
Potri.011G158300 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Sobic.007G048600.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Sopen02g006430 No alias FAD binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 92 233
IPR012951 BBE 498 555
No external refs found!