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  5. Bradi3g35100

Bradi3g35100


Description : RAB GTPase homolog A1F


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g35100
Cluster HCCA clusters: Cluster_411

Target Alias Description ECC score Gene Family Method Actions
Bradi2g16480 No alias RAB GTPase homolog A1F 0.04 Orthogroups_2024-Update
Brara.K00444.1 No alias A-class RAB GTPase 0.02 Orthogroups_2024-Update
GRMZM2G020661 No alias RAB GTPase homolog A1F 0.02 Orthogroups_2024-Update
Glyma.12G120400 No alias RAB GTPase homolog A1F 0.07 Orthogroups_2024-Update
Glyma.13G152610 No alias RAB GTPase homolog A1F 0.02 Orthogroups_2024-Update
LOC_Os03g62600 No alias ras-related protein, putative, expressed 0.02 Orthogroups_2024-Update
MpVg00760.1 No alias No annotation 0.01 Orthogroups_2024-Update
PSME_00054679-RA No alias (at3g12160 : 323.0) Encodes RABA4D, a member of the... 0.02 Orthogroups_2024-Update
Potri.004G226400 No alias RAB GTPase 11C 0.02 Orthogroups_2024-Update
Potri.011G070300 No alias RAB GTPase homolog A1C 0.02 Orthogroups_2024-Update
Seita.9G016900.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Solyc10g045550 No alias Ras-related protein, expressed (AHRD V3.3 *** D8L9F8_WHEAT) 0.02 Orthogroups_2024-Update
Solyc11g010100 No alias Ras-related protein Rab11D (AHRD V3.3 *** RB11D_TOBAC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!