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  5. Bradi3g35771

Bradi3g35771


Description : ATPase, AAA-type, CDC48 protein


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g35771
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00021463.11 No alias (at3g09840 : 945.0) Encodes a cell division cycle... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 248 377
IPR003959 ATPase_AAA_core 522 655
IPR003338 CDC4_N-term_subdom 29 112
IPR004201 Cdc48_dom2 133 190
No external refs found!