Description : Ribosomal protein L34e superfamily protein
Gene families : OG_42_0001465 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001465_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi3g37060 | |
Cluster | HCCA clusters: Cluster_132 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_12213 | No alias | 60s ribosomal protein l34 | 0.04 | Orthogroups_2024-Update | |
At1g26880 | No alias | 60S ribosomal protein L34-1... | 0.03 | Orthogroups_2024-Update | |
Bradi3g16600 | No alias | Ribosomal protein L34e superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.B01869.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Brara.G02472.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Brara.G02897.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Brara.I00329.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
Cre16.g661050 | No alias | Ribosomal protein L34e superfamily protein | 0.11 | Orthogroups_2024-Update | |
Glyma.01G047000 | No alias | Ribosomal protein L34e superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.02G107100 | No alias | Ribosomal protein L34e superfamily protein | 0.06 | Orthogroups_2024-Update | |
Glyma.08G301300 | No alias | Ribosomal protein L34e superfamily protein | 0.07 | Orthogroups_2024-Update | |
HORVU2Hr1G080340.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G066000.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
HORVU7Hr1G071240.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Kfl00598_0060 | kfl00598_0060_v1.1 | (p40590|rl34_pea : 144.0) 60S ribosomal protein L34 -... | 0.01 | Orthogroups_2024-Update | |
LOC_Os09g24690 | No alias | 60S ribosomal protein L34, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_175574g0010 | No alias | (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... | 0.1 | Orthogroups_2024-Update | |
Mp4g17040.1 | No alias | component RPL34 of LSU proteome component | 0.04 | Orthogroups_2024-Update | |
PSME_00038465-RA | No alias | (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... | 0.04 | Orthogroups_2024-Update | |
Potri.012G108400 | No alias | Ribosomal protein L34e superfamily protein | 0.04 | Orthogroups_2024-Update | |
Potri.017G082200 | No alias | Ribosomal protein L34e superfamily protein | 0.05 | Orthogroups_2024-Update | |
Pp1s39_344V6 | No alias | 60s ribosomal protein | 0.03 | Orthogroups_2024-Update | |
Pp1s39_364V6 | No alias | 60s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Pp1s76_47V6 | No alias | 60s ribosomal protein l34 | 0.07 | Orthogroups_2024-Update | |
Seita.2G204000.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Seita.6G057100.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Seita.7G124100.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Sobic.002G200600.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.007G045700.1 | No alias | component *(eL34) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Solyc02g087930 | No alias | 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) | 0.03 | Orthogroups_2024-Update | |
Solyc05g007560 | No alias | 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) | 0.1 | Orthogroups_2024-Update | |
Solyc06g069860 | No alias | 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) | 0.12 | Orthogroups_2024-Update | |
Sopen05g003450 | No alias | Ribosomal protein L34e | 0.08 | Orthogroups_2024-Update | |
Sopen06g027130 | No alias | Ribosomal protein L34e | 0.06 | Orthogroups_2024-Update | |
evm.model.contig_445.6 | No alias | (p41098|rl34_tobac : 125.0) 60S ribosomal protein L34 -... | 0.11 | Orthogroups_2024-Update | |
evm.model.tig00000632.3 | No alias | (at1g26880 : 109.0) Ribosomal protein L34e superfamily... | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Predicted GO |
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004399 | histidinol dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006547 | histidine metabolic process | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008195 | Ribosomal_L34Ae | 1 | 96 |
No external refs found! |