Bradi3g37060


Description : Ribosomal protein L34e superfamily protein


Gene families : OG_42_0001465 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001465_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g37060
Cluster HCCA clusters: Cluster_132

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Target Alias Description ECC score Gene Family Method Actions
A4A49_12213 No alias 60s ribosomal protein l34 0.04 Orthogroups_2024-Update
At1g26880 No alias 60S ribosomal protein L34-1... 0.03 Orthogroups_2024-Update
Bradi3g16600 No alias Ribosomal protein L34e superfamily protein 0.03 Orthogroups_2024-Update
Brara.B01869.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.G02472.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Brara.G02897.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.I00329.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Cre16.g661050 No alias Ribosomal protein L34e superfamily protein 0.11 Orthogroups_2024-Update
Glyma.01G047000 No alias Ribosomal protein L34e superfamily protein 0.05 Orthogroups_2024-Update
Glyma.
Glyma.02G107100 No alias Ribosomal protein L34e superfamily protein 0.06 Orthogroups_2024-Update
Glyma.08G301300 No alias Ribosomal protein L34e superfamily protein 0.07 Orthogroups_2024-Update
HORVU2Hr1G080340.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
HORVU5Hr1G066000.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
HORVU7Hr1G071240.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Kfl00598_0060 kfl00598_0060_v1.1 (p40590|rl34_pea : 144.0) 60S ribosomal protein L34 -... 0.01 Orthogroups_2024-Update
LOC_Os09g24690 No alias 60S ribosomal protein L34, putative, expressed 0.03 Orthogroups_2024-Update
MA_175574g0010 No alias (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... 0.1 Orthogroups_2024-Update
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.04 Orthogroups_2024-Update
PSME_00038465-RA No alias (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... 0.04 Orthogroups_2024-Update
Potri.012G108400 No alias Ribosomal protein L34e superfamily protein 0.04 Orthogroups_2024-Update
Potri.017G082200 No alias Ribosomal protein L34e superfamily protein 0.05 Orthogroups_2024-Update
Pp1s39_344V6 No alias 60s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s39_364V6 No alias 60s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s76_47V6 No alias 60s ribosomal protein l34 0.07 Orthogroups_2024-Update
Seita.2G204000.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Seita.6G057100.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Seita.7G124100.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Sobic.002G200600.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.007G045700.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Solyc02g087930 No alias 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) 0.03 Orthogroups_2024-Update
Solyc05g007560 No alias 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) 0.1 Orthogroups_2024-Update
Solyc06g069860 No alias 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) 0.12 Orthogroups_2024-Update
Sopen05g003450 No alias Ribosomal protein L34e 0.08 Orthogroups_2024-Update
Sopen06g027130 No alias Ribosomal protein L34e 0.06 Orthogroups_2024-Update
evm.model.contig_445.6 No alias (p41098|rl34_tobac : 125.0) 60S ribosomal protein L34 -... 0.11 Orthogroups_2024-Update
evm.model.tig00000632.3 No alias (at1g26880 : 109.0) Ribosomal protein L34e superfamily... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 96
No external refs found!