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  5. Bradi3g38590

Bradi3g38590


Description : F-box/RNI-like superfamily protein


Gene families : OG_42_0000205 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g38590
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Bradi5g22540 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G075590.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g36910 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os04g55770 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os06g04690 No alias OsFBX184 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g49930 No alias OsFBX207 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g32360 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os12g03390 No alias OsFBX435 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.6G009700.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.8G138500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G010000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G187900.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003689 DNA clamp loader activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005663 DNA replication factor C complex IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0033170 protein-DNA loading ATPase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
CC GO:0035658 Mon1-Ccz1 complex IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 36 70
IPR006566 FBD 398 432
No external refs found!